https://nipy.org/nibabel/ ? NiPy ---- NiPy提供了一系列用于功能脑成像数据处理/分析的工具,包括常用的基于一般线性模型(General Linear Model,GLM)的统计分析,silce timing,motion http://nipy.org/nipy/ ?
ith_cluster_silhouette_values.shape[0] y_upper = y_lower + size_cluster_i color = cm.nipy_spectral ax1.set_xticks([-0.1, 0, 0.2, 0.4, 0.6, 0.8, 1]) # Plot the actual clusters colors = cm.nipy_spectral ith_cluster_silhouette_values.shape[0] y_upper = y_lower + size_cluster_i color = cm.nipy_spectral 0.1, 0, 0.2, 0.4, 0.6, 0.8, 1]) # 2nd Plot showing the actual clusters formed colors = cm.nipy_spectral
hot_r, hsv, hsv_r, icefire, icefire_r, inferno, inferno_r, jet, jet_r, magma, magma_r, mako, mako_r, nipy_spectral , nipy_spectral_r, ocean, ocean_r, pink, pink_r, plasma, plasma_r, prism, prism_r, rainbow, rainbow_r
下面这种我喜欢: bubble =plt.scatter(X,Y,c =np.random.rand(100), cmap="nipy_spectral",s= 100*(X**2+Y**2)) plt.colorbar
figure.figsize"] = (7, 7) sc.pl.embedding(ad_cnv, color=['time', 'cluster'], basis='X_umap', title='time', cmap='nipy_spectral figure.figsize"] = (4, 4) sc.pl.embedding(ad_cnv, color=['time', 'cluster'], basis="X_umap", title='time', cmap='nipy_spectral
probabilities y_probas = nb.predict_proba(X) skplt.metrics.plot_precision_recall_curve(y, y_probas, cmap='nipy_spectral
NIPY - A collection of neuroimaging toolkits. 一系列的影像学工具。
probabilities y_probas = nb.predict_proba(X) skplt.metrics.plot_precision_recall_curve(y, y_probas, cmap='nipy_spectral
ith_cluster_silhouette_values.shape[0] y_upper = y_lower + size_cluster_i color = cm.nipy_spectral silhouette_avg, color="red", linestyle="--") # 2nd Plot showing the actual clusters formed colors = cm.nipy_spectral
probabilities y_probas = nb.predict_proba(X) skplt.metrics.plot_precision_recall_curve(y, y_probas, cmap='nipy_spectral
.), (1.0, 0.5, 0.5))} _nipy_spectral_data = { 'red': [(0.0, 0.0, 0.0), (0.05, 0.4667, 0.4667), spring_data, 'summer': _summer_data, 'terrain': _terrain_data, 'winter': _winter_data, 'nipy_spectral ': _nipy_spectral_data, 'spectral': _nipy_spectral_data, # alias for backward compatibility } r, gnuplot_r, gray, gray_r, hot, hot_r, hsv, hsv_r, inferno, inferno_r, jet, jet_r, magma, magma_r, nipy_spectral , nipy_spectral_r, ocean, ocean_r, pink, pink_r, plasma, plasma_r, prism, prism_r, rainbow, rainbow_r
hot_r, hsv, hsv_r, icefire, icefire_r, inferno, inferno_r, jet, jet_r, magma, magma_r, mako, mako_r, nipy_spectral , nipy_spectral_r, ocean, ocean_r, pink, pink_r, plasma, plasma_r, prism, prism_r, rainbow, rainbow_r
gist_earth, terrain, gist_stern, gnuplot, gnuplot2, CMRmap, cubehelix, brg, gist_rainbow, rainbow, jet, nipy_spectral
import matplotlib.pyplot as plt fig, (ax1, ax2) = plt.subplots(1, 2) ax1.imshow(image.T, cmap="nipy_spectral ") ax2.imshow(image_wrong.T, cmap="nipy_spectral") for ax in (ax1, ax2): ax.set_xticks([])
‘gnuplot’, ‘gnuplot2’, ‘CMRmap’, ‘cubehelix’, ‘brg’, ‘gist_rainbow’, ‘rainbow’, ‘jet’, ‘turbo’, ‘nipy_spectral
probabilities y_probas = nb.predict_proba(X) skplt.metrics.plot_precision_recall_curve(y, y_probas, cmap='nipy_spectral
'cubehelix', 'brg', 'gist_rainbow', 'rainbow', 'jet', 'turbo', 'nipy_spectral
gist_earth, terrain, gist_stern, gnuplot, gnuplot2, CMRmap, cubehelix, brg, gist_rainbow, rainbow, jet, nipy_spectral
Nilearn是NiPy生态系统的一部分,这是一个致力于使用Python分析神经成像数据的社区。 7.scikit-learn ? Scikit-learn是另一个python开源项目。
我建议读者去查看一下 nipy 这个项目。 DICOM 到 MINC 的转换 脑成像中心(BIC)的 MINC 团队开发了将 DICOM 转换为 MINC 格式的工具。