我有这样的档案:
26. ZINC19693599
27. ZINC19693598
28. AKOS032468089; ZINC575619353; F6561-5795 ...
29. MolPort-039-321-788; ZINC46759513; AKOS030658283
30. MolPort-039-315-229; AKOS030665655; ZINC108730091
31. MolPort-039-285-275; ZINC253426468; Z1983921961 ...
32. MolPort-039-260-085; ZINC293540464; Z2220694059 ...
33. MolPort-039-256-805; ZINC240871409; Z1978986809 ...
36. MolPort-042-618-243; AKOS026704656; ZINC575617472 ...
37. MolPort-042-617-677; AKOS026704258; ZINC575615033 ...
39. CHEMBL3446533; AKOS030350184; ZINC257247314
40. ZINC257240872
41. AKOS030286562; ZINC257302698
42. AKOS030286561; ZINC257339418
43. AKOS030262257; ZINC257197602
44. MolPort-038-977-160; ZINC225411464; Z1945656395 ...
45. MolPort-038-969-994; AKOS030642012; ZINC191511001
46. MolPort-035-834-516; ZINC170605844; Z366648930 ...
47. MolPort-035-834-509; ZINC170605825; Z366645258 ...
48. ZINC170591573
49. ZINC170591572
50. MolPort-038-956-852; ZINC135661620; Z1443333613 ...
51. MolPort-038-958-774; ZINC119501018; Z1542315705 ...
52. AKOS030442141; ZINC100744266; ZINC257344663
53. AKOS030406331; ZINC100216414; ZINC257287859
54. AKOS030389515; ZINC100159328; ZINC257263109 ...
55. AKOS030389402; ZINC100158990; ZINC257223925
56. AKOS030389401; ZINC100158986; ZINC257331241
57. ZINC97137184
58. ZINC97137179
59. ZINC96485930每一行都应该有ZINC ID (肯定以ZINC开头,但ID的长度可能不一样)。我试图从每一行grep这个以ZINC开头的ID。
在我的结果中,我希望有这样的东西:
ZINC19693599
ZINC19693598
ZINC575619353
ZINC46759513
ZINC108730091
ZINC253426468
ZINC240871409
..etc有人能帮上忙吗?
发布于 2018-09-05 05:17:00
首先grep然后sort -u删除重复项,因此根据您的文件格式,您可以这样做
grep -o 'ZINC[^;]*' infile |sort -uZINC[^;]*正在匹配ZINC之后的模式,直到;看到并排除了;本身。
https://askubuntu.com/questions/1072220
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