Ant未能创建任务或键入apt

Question

命令

ant

我试图在我的本地机器上运行ant任务，但是当我运行ant命令(build.xml位于/home/lushen/batman目录下)时，我一直收到如下所示的错误消息：

错误消息：

Buildfile: /home/lushen/batman/build.xml

init:
     [echo] Building batman-0.1

prepare:

prepare-java:

compile-java:

BUILD FAILED
/home/lushen/batman/build.xml:102: Problem: failed to create task or type apt
Cause: The name is undefined.
Action: Check the spelling.
Action: Check that any custom tasks/types have been declared.
Action: Check that any <presetdef>/<macrodef> declarations have taken place.


Total time: 0 seconds

build.xml放在/home/lushen/batman目录下，build.xml脚本如下所示。

build.xml文件

  <project name="batman" default="all" basedir=".">
  <property environment="env" />

  <target name="all" depends="package-java" />

  <!-- Checks environment and setup variables -->
  <target name="init" description="Checks environment and setup variables">
    <tstamp />
    <property name="version" value="0.1" />

    <property name="build.compiler" value="modern" />

    <property name="bin.dir" value="./bin" />
    <property name="lib.dir" value="./lib" />
    <property name="src.main.dir" value="./src" />
    <property name="manifest.dir" value="./manifest" />
    <property name="resources.dir" value="./resources" />

    <property name="classpath" value="${lib.dir}/biojava.jar:${lib.dir}/bytecode.jar:${lib.dir}/bjv2-core-0.1.jar:${lib.dir}/stax-api-1.0.1.jar:${lib.dir}/colt.jar" />

    <!-- Main build directory -->
    <property name="build.dir" value="./ant-build" />
    <property name="build.classes.dir" value="${build.dir}/classes" />

    <!-- Javac properties -->
    <property name="javac.depend" value="false" />
    <property name="javac.debug" value="true" />
    <property name="javac.deprecation" value="false" />
    <property name="javac.source" value="1.5" />

    <!-- Javadoc properties -->
    <property name="build.dest.docs" value="${build.dir}/docs" />
    <property name="build.dest.doccheck" value="${build.dir}/docs/check" />
    <property name="packages" value="net.*" />

    <!-- Subdirectories for main source and classes -->
    <property name="name.main" value="batman" />
    <property name="Name.main" value="Batman" />
    <property name="build.dest.main" value="${build.classes.dir}/${name.main}" />
    <property name="build.docs.main" value="${build.dest.docs}/${name.main}" />
    <property name="jar.main" value="${lib.dir}/${name.main}.jar" />
    <property name="manifest.file.main" value="${manifest.dir}/${name.main}.txt" />

    <!-- Echo information -->
    <echo message="Building ${name.main}-${version}" />
  </target>


  <!--
    Prepare each part of the project.
    Each preparation creates working directories and copies files over.
  -->

  <!-- Prepares the basic stuff -->
  <target name="prepare" depends="init" description="creates basic directories">
    <!-- Creates directories -->
    <mkdir dir="${build.dir}" />
    <mkdir dir="${bin.dir}" />
  </target>

  <!-- Prepares the source code -->
  <target name="prepare-java" depends="prepare" description="Prepares java source files">
    <!-- Creates directories -->
    <mkdir dir="${build.dest.main}" />
    <mkdir dir="${build.docs.main}" />
  </target>

  <!-- Prepares the javadocs -->
  <target name="prepare-javadocs" depends="prepare" description="Prepares the javadocs">
    <!-- Creates directories -->
    <mkdir dir="${build.dest.docs}" />
  </target>


  <!-- Compiles the source directory -->
  <target name="compile-java" depends="prepare-java" description="Compiles the java source code">
    <apt
      destdir="${build.dest.main}"
      depend="${javac.depend}"
      deprecation="${javac.deprecation}"
      debug="${javac.debug}"
      srcdir="${src.main.dir}">
      <classpath>
        <pathelement path="${classpath}" />
    <pathelement path="${build.dest.build}" />
      </classpath>

      <filename name="batman/**/*.java" />
    </apt>
  </target>

此外，我还在/etc/profile.d目录下创建了ant并编辑了ant.sh文件，如下所示。

ant.sh文件

export ANT_HOME=/usr/local/ant
export PATH=${ANT_HOME}/bin:${PATH}

我从未使用过Java，所以我的问题可能很愚蠢。我在论坛上读过类似的问题，但没有一个能解决我的问题。我使用的是Ubuntu，Apache Ant(TM)版本1.10.5,2018年7月10日编译，openjdk版本"10.0.2“2018-07-17.Changing Java和ant to古版本无助于解决问题。已经安装了BioJava。

我还尝试将build.xml中的所有'apt‘替换为'javac’，但这次我收到了以下错误消息：

新错误消息如果在build.xml中将'apt‘替换为'javac’

Buildfile: /home/lushen/batman/build.xml

init:
     [echo] Building batman-0.1

prepare:

prepare-java:

compile-java:
    [javac] Compiling 55 source files to /home/lushen/batman/ant-build/classes/batman
    [javac] /home/lushen/batman/src/batman/AddExpt.java:6: error: package org.biojava.utils does not exist
    [javac] import org.biojava.utils.JDBCPooledDataSource;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/AddExpt.java:7: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/AddExpt.java:8: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/AddExpt.java:10: error: cannot find symbol
    [javac] @App(overview="Add experiment metadata to a Batman DB", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/Calibrate.java:16: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFDocumentHandler;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:17: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFParser;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:18: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFRecord;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:19: error: package org.biojava.bio.seq does not exist
    [javac] import org.biojava.bio.seq.DNATools;
    [javac]                           ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:20: error: package org.biojava.bio.seq does not exist
    [javac] import org.biojava.bio.seq.Sequence;
    [javac]                           ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:21: error: package org.biojava.bio.symbol does not exist
    [javac] import org.biojava.bio.symbol.Location;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:22: error: package org.biojava.bio.symbol does not exist
    [javac] import org.biojava.bio.symbol.LocationTools;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:23: error: package org.biojava.bio.symbol does not exist
    [javac] import org.biojava.bio.symbol.RangeLocation;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:24: error: package org.biojava.bio.symbol does not exist
    [javac] import org.biojava.bio.symbol.SimpleSymbolList;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:25: error: package org.biojava.bio.symbol does not exist
    [javac] import org.biojava.bio.symbol.Symbol;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:26: error: package org.biojava.bio.symbol does not exist
    [javac] import org.biojava.bio.symbol.SymbolList;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:27: error: package org.biojava.utils does not exist
    [javac] import org.biojava.utils.JDBCPooledDataSource;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:28: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:29: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/Calibrate.java:37: error: cannot find symbol
    [javac] @App(overview="Perform per-array calibration of the Batman model", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/Calibrate.java:56: error: cannot find symbol
    [javac]     private Map<String,Location> mask = null;
    [javac]                        ^
    [javac]   symbol:   class Location
    [javac]   location: class Calibrate
    [javac] /home/lushen/batman/src/batman/Calibrate.java:170: error: cannot find symbol
    [javac]     private double tm(SymbolList sl)
    [javac]                       ^
    [javac]   symbol:   class SymbolList
    [javac]   location: class Calibrate
    [javac] /home/lushen/batman/src/batman/Calibrate.java:186: error: cannot find symbol
    [javac]     private final Symbol C = DNATools.c();
    [javac]                   ^
    [javac]   symbol:   class Symbol
    [javac]   location: class Calibrate
    [javac] /home/lushen/batman/src/batman/Calibrate.java:187: error: cannot find symbol
    [javac]     private final Symbol G = DNATools.g();
    [javac]                   ^
    [javac]   symbol:   class Symbol
    [javac]   location: class Calibrate
    [javac] /home/lushen/batman/src/batman/DmrT.java:12: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFDocumentHandler;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/DmrT.java:13: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFParser;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/DmrT.java:14: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFRecord;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/DmrT.java:15: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFWriter;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/DmrT.java:16: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.SimpleGFFRecord;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/DmrT.java:17: error: package org.bjv2.util does not exist
    [javac] import org.bjv2.util.SmallMap;
    [javac]                     ^
    [javac] /home/lushen/batman/src/batman/DmrT.java:18: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/DmrT.java:19: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/DmrT.java:21: error: cannot find symbol
    [javac] @App(overview="...", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/DmrT.java:146: error: cannot find symbol
    [javac]     private Map<String,GFFRecord> loadGFF(String fileName)
    [javac]                        ^
    [javac]   symbol:   class GFFRecord
    [javac]   location: class DmrT
    [javac] /home/lushen/batman/src/batman/DumpMedipGFF.java:9: error: package org.biojava.utils does not exist
    [javac] import org.biojava.utils.JDBCPooledDataSource;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/DumpMedipGFF.java:10: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/DumpMedipGFF.java:11: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/DumpMedipGFF.java:13: error: cannot find symbol
    [javac] @App(overview="Re-export MeDIP data from a Batman DB", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/DumpMedipGFF2.java:9: error: package org.biojava.utils does not exist
    [javac] import org.biojava.utils.JDBCPooledDataSource;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/DumpMedipGFF2.java:10: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/DumpMedipGFF2.java:11: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/DumpMedipGFF2.java:13: error: cannot find symbol
    [javac] @App(overview="Re-export MeDIP data from a Batman DB", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/EstimateCouplingProfile.java:5: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/EstimateCouplingProfile.java:6: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/EstimateCouplingProfile.java:8: error: cannot find symbol
    [javac] @App(overview="Probe-coupling simulation", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/FitBeta.java:11: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/FitBeta.java:16: error: package cern.jet.stat does not exist
    [javac] import cern.jet.stat.Gamma;
    [javac]                     ^
    [javac] /home/lushen/batman/src/batman/FitBeta.java:18: error: cannot find symbol
    [javac] @App(overview="MCMC fit of a Beta distribution to some data", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/LoadCouplingProfile.java:8: error: package org.biojava.utils does not exist
    [javac] import org.biojava.utils.JDBCPooledDataSource;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadCouplingProfile.java:9: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadCouplingProfile.java:10: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadCouplingProfile.java:14: error: cannot find symbol
    [javac] @App(overview="Load a coupling profile into a Batman DB", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:10: error: package org.biojava.bio does not exist
    [javac] import org.biojava.bio.Annotation;
    [javac]                       ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:11: error: package org.biojava.bio.seq does not exist
    [javac] import org.biojava.bio.seq.DNATools;
    [javac]                           ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:12: error: package org.biojava.bio.seq does not exist
    [javac] import org.biojava.bio.seq.Sequence;
    [javac]                           ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:13: error: package org.biojava.bio.seq does not exist
    [javac] import org.biojava.bio.seq.SequenceIterator;
    [javac]                           ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:14: error: package org.biojava.bio.seq.db does not exist
    [javac] import org.biojava.bio.seq.db.HashSequenceDB;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:15: error: package org.biojava.bio.seq.db does not exist
    [javac] import org.biojava.bio.seq.db.SequenceDB;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:16: error: package org.biojava.bio.seq.impl does not exist
    [javac] import org.biojava.bio.seq.impl.SimpleSequence;
    [javac]                                ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:17: error: package org.biojava.bio.seq.io does not exist
    [javac] import org.biojava.bio.seq.io.SeqIOTools;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:18: error: package org.biojava.bio.symbol does not exist
    [javac] import org.biojava.bio.symbol.Symbol;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:19: error: package org.biojava.utils does not exist
    [javac] import org.biojava.utils.JDBCPooledDataSource;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:20: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:21: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:25: error: cannot find symbol
    [javac] @App(overview="Load genomic sequence into a Batman DB", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/LoadGenomeTiles.java:31: error: cannot find symbol
    [javac]     private SequenceDB seqdb;
    [javac]             ^
    [javac]   symbol:   class SequenceDB
    [javac]   location: class LoadGenomeTiles
    [javac] /home/lushen/batman/src/batman/LoadProbes.java:10: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFDocumentHandler;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/LoadProbes.java:11: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFParser;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/LoadProbes.java:12: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFRecord;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/LoadProbes.java:13: error: package org.biojava.utils does not exist
    [javac] import org.biojava.utils.JDBCPooledDataSource;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadProbes.java:14: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadProbes.java:15: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadProbes.java:19: error: cannot find symbol
    [javac] @App(overview="Load probe and ROI data into a Batman database", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/LoadProbes.java:105: error: cannot find symbol
    [javac]     private String gaga(GFFRecord r, String key)
    [javac]                         ^
    [javac]   symbol:   class GFFRecord
    [javac]   location: class LoadProbes
    [javac] /home/lushen/batman/src/batman/LoadProbes.java:110: error: cannot find symbol
    [javac]     private String gaga2(GFFRecord r, String key1, String key2)
    [javac]                          ^
    [javac]   symbol:   class GFFRecord
    [javac]   location: class LoadProbes
    [javac] /home/lushen/batman/src/batman/LoadRatsGFF.java:8: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFDocumentHandler;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/LoadRatsGFF.java:9: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFParser;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/LoadRatsGFF.java:10: error: package org.biojava.bio.program.gff does not exist
    [javac] import org.biojava.bio.program.gff.GFFRecord;
    [javac]                                   ^
    [javac] /home/lushen/batman/src/batman/LoadRatsGFF.java:11: error: package org.biojava.utils does not exist
    [javac] import org.biojava.utils.JDBCPooledDataSource;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadRatsGFF.java:12: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadRatsGFF.java:13: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/LoadRatsGFF.java:17: error: cannot find symbol
    [javac] @App(overview="Load almost-Nimblegen-style GFF log-ratio data into Batman DB", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/LoadRatsGFF.java:128: error: cannot find symbol
    [javac]     private String gaga(GFFRecord r, String key)
    [javac]                         ^
    [javac]   symbol:   class GFFRecord
    [javac]   location: class LoadRatsGFF
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:15: error: package org.biojava.bio does not exist
    [javac] import org.biojava.bio.Annotation;
    [javac]                       ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:16: error: package org.biojava.bio.seq does not exist
    [javac] import org.biojava.bio.seq.DNATools;
    [javac]                           ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:17: error: package org.biojava.bio.seq does not exist
    [javac] import org.biojava.bio.seq.Sequence;
    [javac]                           ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:18: error: package org.biojava.bio.seq does not exist
    [javac] import org.biojava.bio.seq.SequenceIterator;
    [javac]                           ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:19: error: package org.biojava.bio.seq.db does not exist
    [javac] import org.biojava.bio.seq.db.HashSequenceDB;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:20: error: package org.biojava.bio.seq.db does not exist
    [javac] import org.biojava.bio.seq.db.SequenceDB;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:21: error: package org.biojava.bio.seq.impl does not exist
    [javac] import org.biojava.bio.seq.impl.SimpleSequence;
    [javac]                                ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:22: error: package org.biojava.bio.seq.io does not exist
    [javac] import org.biojava.bio.seq.io.SeqIOTools;
    [javac]                              ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:23: error: package org.biojava.utils does not exist
    [javac] import org.biojava.utils.JDBCPooledDataSource;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:24: error: package org.biojava.utils.xml does not exist
    [javac] import org.biojava.utils.xml.PrettyXMLWriter;
    [javac]                             ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:25: error: package org.biojava.utils.xml does not exist
    [javac] import org.biojava.utils.xml.XMLWriter;
    [javac]                             ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:26: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.App;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:27: error: package org.bjv2.util.cli does not exist
    [javac] import org.bjv2.util.cli.Option;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:38: error: package cern.colt.list does not exist
    [javac] import cern.colt.list.DoubleArrayList;
    [javac]                      ^
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:40: error: cannot find symbol
    [javac] @App(overview="Sample from Batman model for a group of probes", generateStub=true)
    [javac]  ^
    [javac]   symbol: class App
    [javac] /home/lushen/batman/src/batman/SampleMethStates.java:47: error: cannot find symbol
    [javac]     private SequenceDB seqdb;
    [javac]             ^
    [javac]   symbol:   class SequenceDB
    [javac]   location: class SampleMethStates
    [javac] /home/lushen/batman/src/batman/Summarize.java:19: error: package org.biojava.utils does not exist
    [javac] import org.biojava.utils.JDBCPooledDataSource;
    [javac]                         ^
    [javac] /home/lushen/batman/src/batman/Summarize.java:20: error: package org.bjv2.util does not exist
    [javac] import org.bjv2.util.SmallSet;
    [javac]                     ^
    [javac] Note: Some input files use unchecked or unsafe operations.
    [javac] Note: Recompile with -Xlint:unchecked for details.
    [javac] 100 errors
    BUILD FAILED
/home/lushen/batman/build.xml:103: Compile failed; see the compiler error output for details.

Total time: 2 seconds

似乎我没有安装一堆相关的软件包。但是我不知道怎么安装它们。

当我运行ant时，请帮助我解决“未能创建任务或键入apt”问题。我真的很感激你的帮助！

Answer 1

检查你的env我发现你在用

openjdk版"10.0.2“2018-07-17。

ant的apt功能只适用于：

此任务在Java1.5到Java1.7上运行。 Java1.6中不推荐Apt，它可以作为javac的一部分运行注释处理器，并从Java1.8的发行版中删除。当试图在Java1.8下运行时，该任务将触发异常。

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