我最近刚在一个新的Ubuntu14.04安装上安装了Anaconda 3(用于Python 3.4)。
当我启动spyder时,会收到以下错误消息:
No module named 'version'
Traceback (most recent call last):
File "/home/daniel/anaconda3/bin/spyder", line 3, in <module>
start_app.main()
File "/home/daniel/anaconda3/lib/python3.4/site-packages/spyderlib/start_app.py", line 91, in main
from spyderlib import spyder
File "/home/daniel/anaconda3/lib/python3.4/site-packages/spyderlib/spyder.py", line 158, in <module>
from spyderlib.utils.environ import WinUserEnvDialog
File "/home/daniel/anaconda3/lib/python3.4/site-packages/spyderlib/utils/environ.py", line 17, in <module>
from spyderlib.widgets.dicteditor import DictEditor
File "/home/daniel/anaconda3/lib/python3.4/site-packages/spyderlib/widgets/dicteditor.py", line 28, in <module>
from spyderlib.utils.qthelpers import mimedata2url
File "/home/daniel/anaconda3/lib/python3.4/site-packages/spyderlib/utils/qthelpers.py", line 24, in <module>
from spyderlib.guiconfig import get_shortcut
File "/home/daniel/anaconda3/lib/python3.4/site-packages/spyderlib/guiconfig.py", line 24, in <module>
from spyderlib.widgets.sourcecode import syntaxhighlighters as sh
File "/home/daniel/anaconda3/lib/python3.4/site-packages/spyderlib/widgets/sourcecode/syntaxhighlighters.py", line 32, in <module>
required_version=PYGMENTS_REQVER)
File "/home/daniel/anaconda3/lib/python3.4/site-packages/spyderlib/dependencies.py", line 70, in add
installed_version)]
File "/home/daniel/anaconda3/lib/python3.4/site-packages/spyderlib/dependencies.py", line 32, in __init__
self.installed_version = programs.get_module_version(modname)
File "/home/daniel/anaconda3/lib/python3.4/site-packages/spyderlib/utils/programs.py", line 218, in get_module_version
mod = __import__(module_name)文件"/home/daniel/qiime_software/sphinx-1.0.4-release/lib/python2.7/site-packages/Pygments-1.6-py2.7.egg/pygments/init.py",第46行,除了TypeError,err:^ SyntaxError:无效语法
我安装了Conda3.7,方法是通过.sh下载http://continuum.io/downloads#py34文件,然后用“bashAnaconda3-2.1.0-linux-x86_64.sh”安装它。
有什么问题吗?
我可能注意到了这个问题,但仍然需要一些帮助:
当我第一次安装这个Ubuntu的时候,我把QIIME放在这里(这是一组程序,已经在他们自己的生物信息学环境中工作)。
我看到在文件调用列表中,所有内容都来自./anaconda3 3/.直到最后一行,有些东西是错误的(?)从./ called _software/..。
我假设这是两个软件套件里都有蟒蛇.如何解决这个问题呢?当我检查终端中的“哪个python”时,它(正确地)输出:
/home/daniel/anaconda3/bin/python我几乎想到了前面问过的一个问题:Anaconda Spyder Qt library error on launch会引导我走上正确的道路,但我遇到了一个死胡同。
更新:
echo $PYTHONPATH吐出:
/home/daniel/qiime_software/qiime-galaxy-0.0.1-repository-c2814c3c/lib/:/home/daniel/qiime_software/qiime-1.8.0-release/lib/python2.7/site-packages:/home/daniel/qiime_software/qiime-1.8.0-release/lib/:/home/daniel/qiime_software/matplotlib-1.3.1-release/lib/python2.7/site-packages:/home/daniel/qiime_software/pprospector-1.0.1-release/lib/python2.7/site-packages:/home/daniel/qiime_software/tax2tree-1.0-release/lib/python2.7/site-packages:/home/daniel/qiime_software/pynast-1.2.2-release/lib/python2.7/site-packages:/home/daniel/qiime_software/emperor-0.9.3-release/lib/python2.7/site-packages:/home/daniel/qiime_software/pycogent-1.5.3-release/lib/python2.7/site-packages:/home/daniel/qiime_software/biom-format-1.3.1-release/lib/python2.7/site-packages:/home/daniel/qiime_software/ipython-latest-repository-184467d4/lib/python2.7/site-packages:/home/daniel/qiime_software/sphinx-1.0.4-release/lib/python2.7/site-packages:/home/daniel/qiime_software/pyqi-0.3.1-release/lib/python2.7/site-packages:/home/daniel/qiime_software/MySQL-python-1.2.3-release/lib/python2.7/site-packages:/home/daniel/qiime_software/mpi4py-1.2.2-release/lib/python2.7/site-packages:/home/daniel/qiime_software/setuptools-0.6c11-release/lib/python2.7/site-packages:/home/daniel/qiime_software/gdata-2.0.17-release/lib/python2.7/site-packages:/home/daniel/qiime_software/pysqlite-2.6.3-release/lib/python2.7/site-packages:/home/daniel/qiime_software/qcli-0.1.0-release/lib/python2.7/site-packages:/home/daniel/qiime_software/tornado-3.1.1-release/lib/python2.7/site-packages:/home/daniel/qiime_software/SQLAlchemy-0.7.1-release/lib/python2.7/site-packages:/home/daniel/qiime_software/pyzmq-2.1.11-release/lib/python2.7/site-packages:/home/daniel/qiime_software/numpy-1.7.1-release/lib/python2.7/site-packages:
任何帮助都是非常感谢的。
发布于 2014-10-09 07:39:32
Python在环境变量PYTHONPATH中查找模块,所以在shell上尝试使用echo $PYTHONPATH。通常情况下,这个应该是空的。
否则,您可以尝试在专用环境中运行spyder,因此可以尝试如下:
$ conda create -n spydertest spyder
$ source activate spydertest
$ spyderhttps://stackoverflow.com/questions/26271927
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