Linux中RInside示例编译失败

Question

我试图在Ubuntu上的包中的标准示例中使用RInside。安装后，我在RInside源代码中使用了make命令。

关于我的操作系统的信息: gcc版本4.8.2 (Ubuntu4.8.2-19ubuntu1)，GNU 3.81，R版本3.0.2 (2013-09-25)，RInside 0.2.11和Ubuntu14.04。

这是编译错误。有人能帮我吗？)

g++ -I/usr/share/R/include -I/usr/local/lib/R/site-library/Rcpp/include -I/usr/local/lib/R/site-library/RInside/include -O3 -pipe -g -Wall    rinside_module_sample0.cpp  -L/usr/lib/R/lib -lR  -lblas -llapack  -L/usr/local/lib/R/site-library/RInside/lib -lRInside -Wl,-rpath,/usr/local/lib/R/site-library/RInside/lib -o rinside_module_sample0
In file included from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:64:0,
             from /usr/local/lib/R/site-library/RInside/include/RInsideCommon.h:38,
             from /usr/local/lib/R/site-library/RInside/include/RInside.h:26,
             from rinside_module_sample0.cpp:7:
rinside_module_sample0.cpp: In function ‘int main(int, char**)’:
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:451:5: error: ‘Shield’ was not declared in this scope
 Shield<SEXP> __load_module_call__( Rf_lang2( GET_MODULE_SYM, _rcpp_module_boot_##NAME() ); \
 ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:451:5: note: suggested alternative:
 Shield<SEXP> __load_module_call__( Rf_lang2( GET_MODULE_SYM, _rcpp_module_boot_##NAME() ); \
 ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
In file included from /usr/local/lib/R/site-library/Rcpp/include/Rcpp/protection/protection.h:21:0,
             from /usr/local/lib/R/site-library/Rcpp/include/RcppCommon.h:129,
             from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:27,
             from /usr/local/lib/R/site-library/RInside/include/RInsideCommon.h:38,
             from /usr/local/lib/R/site-library/RInside/include/RInside.h:26,
             from rinside_module_sample0.cpp:7:
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/protection/Shield.h:29:11: note:   ‘Rcpp::Shield’
 class Shield{
       ^
In file included from /usr/local/lib/R/site-library/Rcpp/include/Rcpp.h:64:0,
             from /usr/local/lib/R/site-library/RInside/include/RInsideCommon.h:38,
             from /usr/local/lib/R/site-library/RInside/include/RInside.h:26,
             from rinside_module_sample0.cpp:7:
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:451:16: error: expected primary-expression before ‘>’ token
 Shield<SEXP> __load_module_call__( Rf_lang2( GET_MODULE_SYM, _rcpp_module_boot_##NAME() ); \
            ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:451:94: error: expected ‘)’ before ‘;’ token
 Shield<SEXP> __load_module_call__( Rf_lang2( GET_MODULE_SYM, _rcpp_module_boot_##NAME() ); \
                                                                                          ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:452:13: error: ‘__load_module_call__’ was not declared in this scope
 Rf_eval(__load_module_call__), R_GlobalEnv );
         ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
/usr/local/lib/R/site-library/Rcpp/include/Rcpp/Module.h:452:48: error: expected ‘;’ before ‘)’ token
 Rf_eval(__load_module_call__), R_GlobalEnv );
                                            ^
rinside_module_sample0.cpp:27:18: note: in expansion of macro ‘LOAD_RCPP_MODULE’
 R["bling"] = LOAD_RCPP_MODULE(bling) ;
              ^
make: *** [rinside_module_sample0] Error 1

Answer 1

您的问题没有向展示是如何启动编译的。RInside依赖于R和Rcpp，因此使用一个中等复杂的Makefile。但如果你只是认为事情应该能顺利进行。在我的Ubuntu14.04系统上，使用中的代码，它与您从CRAN获得的包一起安装：

edd@max:~$ cd git/rinside/inst/examples/standard/
edd@max:~/git/rinside/inst/examples/standard$ make rinside_sample0
g++-4.8 -I/usr/share/R/include -I/usr/local/lib/R/site-library/Rcpp/include \
 -I/usr/local/lib/R/site-library/RInside/include -g -O2 -fstack-protector \
 --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 \
 -g -O3 -Wall -pipe -Wno-unused -pedantic -Wall   \
  rinside_sample0.cpp  -Wl,--export-dynamic -fopenmp  -L/usr/lib/R/lib \
  -lR -lpcre -llzma -lbz2 -lz -lrt -ldl -lm  -lblas -llapack  \
  -L/usr/local/lib/R/site-library/RInside/lib \
  -lRInside -Wl,-rpath,/usr/local/lib/R/site-library/RInside/lib \
   -o rinside_sample0
edd@max:~/git/rinside/inst/examples/standard$ ./rinside_sample0 
Hello, world!
edd@max:~/git/rinside/inst/examples/standard$ 

这是相当冗长的，因为我更改了Debian/Ubuntu包的R，以反映许多默认的硬化标志，此外，我们需要头部和库的一些事情。

但最主要的是:只需在示例目录中使用make，就可以构建所有内容。