熊猫数据的.vcf数据

Question

如何将以下.vcf数据转换为熊猫数据？

GDrive链接到.txt文件

理想情况下，我希望它的形式：

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到目前为止，我只能得到标题：

import pandas as pd

f = open('clinvar_final.txt',"r")

for line in f.readlines():
    if line[:5] == 'CHROM':
        vcf_header = line.strip().split('\t')

df = pd.DataFrame
df.header = vcf_header

Answer 1

import pandas as pd with open(filename, "r") as f: lines = f.readlines() chrom_index = [i for i, line in enumerate(lines) if line.strip().startswith("#CHROM")] data = lines[chrom_index[0]:]

header = data[0].strip().split("\t") informations = [d.strip().split("\t") for d in data[1:]]

vcf = pd.DataFrame(informations, columns=header)