对于某些人来说,是否有可能改变这段代码,以便在二项式回归模型中允许随机效应。这是运行二项逻辑回归(来自jmv包的logRegBin函数)的代码,但它不允许随机效应。
R文件
logRegBin {jmv} R Documentation
Binomial Logistic Regression
Description
Binomial Logistic Regression
Usage
logRegBin(data, dep, covs = NULL, factors = NULL,
blocks = list(list()), refLevels = NULL, modelTest = FALSE,
dev = TRUE, aic = TRUE, bic = FALSE, pseudoR2 = list("r2mf"),
omni = FALSE, ci = FALSE, ciWidth = 95, OR = FALSE,
ciOR = FALSE, ciWidthOR = 95, emMeans = list(list()),
ciEmm = TRUE, ciWidthEmm = 95, emmPlots = TRUE,
emmTables = FALSE, emmWeights = TRUE, class = FALSE, acc = FALSE,
spec = FALSE, sens = FALSE, auc = FALSE, rocPlot = FALSE,
cutOff = 0.5, cutOffPlot = FALSE, collin = FALSE,
boxTidwell = FALSE, cooks = FALSE)
Arguments
data
the data as a data frame
dep
a string naming the dependent variable from data, variable must be a factor
covs
a vector of strings naming the covariates from data
factors
a vector of strings naming the fixed factors from data
blocks
a list containing vectors of strings that name the predictors that are added to the model. The elements are added to the model according to their order in the list
refLevels
a list of lists specifying reference levels of the dependent variable and all the factors
modelTest
TRUE or FALSE (default), provide the model comparison between the models and the NULL model
dev
TRUE (default) or FALSE, provide the deviance (or -2LogLikelihood) for the models
aic
TRUE (default) or FALSE, provide Aikaike's Information Criterion (AIC) for the models
bic
TRUE or FALSE (default), provide Bayesian Information Criterion (BIC) for the models
pseudoR2
one or more of 'r2mf', 'r2cs', or 'r2n'; use McFadden's, Cox & Snell, and Nagelkerke pseudo-R², respectively
omni
TRUE or FALSE (default), provide the omnibus likelihood ratio tests for the predictors
ci
TRUE or FALSE (default), provide a confidence interval for the model coefficient estimates
ciWidth
a number between 50 and 99.9 (default: 95) specifying the confidence interval width
OR
TRUE or FALSE (default), provide the exponential of the log-odds ratio estimate, or the odds ratio estimate
ciOR
TRUE or FALSE (default), provide a confidence interval for the model coefficient odds ratio estimates
ciWidthOR
a number between 50 and 99.9 (default: 95) specifying the confidence interval width
emMeans
a list of lists specifying the variables for which the estimated marginal means need to be calculate. Supports up to three variables per term.
ciEmm
TRUE (default) or FALSE, provide a confidence interval for the estimated marginal means
ciWidthEmm
a number between 50 and 99.9 (default: 95) specifying the confidence interval width for the estimated marginal means
emmPlots
TRUE (default) or FALSE, provide estimated marginal means plots
emmTables
TRUE or FALSE (default), provide estimated marginal means tables
emmWeights
TRUE (default) or FALSE, weigh each cell equally or weigh them according to the cell frequency
class
TRUE or FALSE (default), provide a predicted classification table (or confusion matrix)
acc
TRUE or FALSE (default), provide the predicted accuracy of outcomes grouped by the cut-off value
spec
TRUE or FALSE (default), provide the predicted specificity of outcomes grouped by the cut-off value
sens
TRUE or FALSE (default), provide the predicted sensitivity of outcomes grouped by the cut-off value
auc
TRUE or FALSE (default), provide the rea under the ROC curve (AUC)
rocPlot
TRUE or FALSE (default), provide a ROC curve plot
cutOff
TRUE or FALSE (default), set a cut-off used for the predictions
cutOffPlot
TRUE or FALSE (default), provide a cut-off plot
collin
TRUE or FALSE (default), provide VIF and tolerence collinearity statistics
boxTidwell
TRUE or FALSE (default), provide Box-Tidwell test for linearity of the logit
cooks
TRUE or FALSE (default), provide summary statistics for the Cook's distancehttps://stackoverflow.com/questions/74539594
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