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社区首页 >问答首页 >未能在python上安装GDAL :截至11月8日3.9

问未能在python上安装GDAL :截至11月8日3.9
EN

Stack Overflow用户
提问于 2022-11-09 15:53:05
回答 1查看 115关注 0票数 2

在2022年11月8日之前，我有一个成功安装GDAL3.5.0的码头容器。最后一次使用完全相同代码的构建是在11月7日。这些故障发生在默认的GitHub操作(或AWS代码构建运行程序)上的远程环境中，而且本地没有发生相同的错误。如果不进行更改，下面的堆栈跟踪将失败。

，我的问题是，是否有人可以根据堆栈跟踪的输出，向正确的方向指出我的调查重点。

失败的行：

代码语言：javascript
复制
pip3 install --no-cache-dir GDAL==3.5.0

我已经跑了：

代码语言：javascript
复制
RUN apt-get update && \
    apt-get install -y \
    python3-pip \
    locales \
    libspatialindex-dev \
    gcc \
    && apt-get -t testing install -y --no-install-recommends libgdal-dev \
    && ln -s /usr/lib/ogdi/libvrf.so /usr/lib \
    && rm -rf /var/lib/apt/lists/* \

ENV CPLUS_INCLUDE_PATH=/usr/include/gdal
ENV C_INCLUDE_PATH=/usr/include/gdal

这是故障的(冗长的)堆栈跟踪：

代码语言：javascript
复制
#11 [dependencies 3/4] RUN pip3 install --no-cache-dir GDAL==3.5.0
#11 sha256:6dbd22edad17147be79b0611f8e1a8f0fdc44a139c8e2e11d393e563d28fbd64
#11 0.757 Collecting GDAL==3.5.0
#11 0.782   Downloading GDAL-3.5.0.tar.gz (752 kB)
#11 0.796      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 752.0/752.0 KB 64.9 MB/s eta 
...
#11 15.20       creating build/temp.linux-x86_64-3.9/extensions
#11 15.20       gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/usr/local/include/python3.9 -I. -I/usr/include -c extensions/ogr_wrap.cpp -o build/temp.linux-x86_64-3.9/extensions/ogr_wrap.o -I/usr/include/gdal
#11 15.20       creating build/temp.linux-x86_64-3.9/extensions
#11 15.20       building 'osgeo._gnm' extension
#11 15.20       gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/usr/local/include/python3.9 -I. -I/usr/include -c extensions/gdal_wrap.cpp -o build/temp.linux-x86_64-3.9/extensions/gdal_wrap.o -I/usr/include/gdal
#11 15.20       gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/usr/local/include/python3.9 -I. -I/usr/include -c extensions/osr_wrap.cpp -o build/temp.linux-x86_64-3.9/extensions/osr_wrap.o -I/usr/include/gdal
#11 15.20       gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/usr/local/include/python3.9 -I. -I/usr/include -c extensions/gdalconst_wrap.c -o build/temp.linux-x86_64-3.9/extensions/gdalconst_wrap.o -I/usr/include/gdal
#11 15.20       gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I../../port -I../../gcore -I../../alg -I../../ogr/ -I../../ogr/ogrsf_frmts -I../../gnm -I../../apps -I/usr/local/include/python3.9 -I. -I/usr/include -c extensions/gnm_wrap.cpp -o build/temp.linux-x86_64-3.9/extensions/gnm_wrap.o -I/usr/include/gdal
#11 15.20       extensions/gdalconst_wrap.c: In function ‘PyInit__gdalconst’:
#11 15.20       extensions/gdalconst_wrap.c:3710:3: warning: ‘PyEval_InitThreads’ is deprecated [-Wdeprecated-declarations]
#11 15.20        3710 |   SWIG_PYTHON_INITIALIZE_THREADS;
#11 15.20             |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#11 15.20       In file included from /usr/local/include/python3.9/Python.h:140,
#11 15.20                        from extensions/gdalconst_wrap.c:156:
#11 15.20       /usr/local/include/python3.9/ceval.h:130:37: note: declared here
#11 15.20         130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void);
#11 15.20             |                                     ^~~~~~~~~~~~~~~~~~
#11 15.20       extensions/osr_wrap.cpp: In function ‘PyObject* PyInit__osr()’:
#11 15.20       extensions/osr_wrap.cpp:982:65: warning: ‘void PyEval_InitThreads()’ is deprecated [-Wdeprecated-declarations]
#11 15.20         982 | #     define SWIG_PYTHON_INITIALIZE_THREADS  PyEval_InitThreads()
#11 15.20             |                                                                 ^
#11 15.20       extensions/osr_wrap.cpp:19126:3: note: in expansion of macro ‘SWIG_PYTHON_INITIALIZE_THREADS’
#11 15.20       19126 |   SWIG_PYTHON_INITIALIZE_THREADS;
#11 15.20             |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#11 15.20       In file included from /usr/local/include/python3.9/Python.h:140,
#11 15.20                        from extensions/osr_wrap.cpp:180:
#11 15.20       /usr/local/include/python3.9/ceval.h:130:37: note: declared here
#11 15.20         130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void);
#11 15.20             |                                     ^~~~~~~~~~~~~~~~~~
#11 15.20       extensions/gnm_wrap.cpp: In function ‘PyObject* PyInit__gnm()’:
#11 15.20       extensions/gnm_wrap.cpp:982:65: warning: ‘void PyEval_InitThreads()’ is deprecated [-Wdeprecated-declarations]
#11 15.20         982 | #     define SWIG_PYTHON_INITIALIZE_THREADS  PyEval_InitThreads()
#11 15.20             |                                                                 ^
#11 15.20       extensions/gnm_wrap.cpp:6539:3: note: in expansion of macro ‘SWIG_PYTHON_INITIALIZE_THREADS’
#11 15.20        6539 |   SWIG_PYTHON_INITIALIZE_THREADS;
#11 15.20             |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#11 15.20       In file included from /usr/local/include/python3.9/Python.h:140,
#11 15.20                        from extensions/gnm_wrap.cpp:180:
#11 15.20       /usr/local/include/python3.9/ceval.h:130:37: note: declared here
#11 15.20         130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void);
#11 15.20             |                                     ^~~~~~~~~~~~~~~~~~
#11 15.20       gcc -pthread -shared build/temp.linux-x86_64-3.9/extensions/gdalconst_wrap.o -L../../.libs -L../../ -L/usr/local/lib -L/usr/lib -lgdal -o build/lib.linux-x86_64-3.9/osgeo/_gdalconst.cpython-39-x86_64-linux-gnu.so
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libc.so.6: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libc.so.6 when searching for /lib/x86_64-linux-gnu/libc.so.6
#11 15.20       /usr/bin/ld: cannot find /lib/x86_64-linux-gnu/libc.so.6
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libc.so.6: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libc.so.6 when searching for /lib/x86_64-linux-gnu/libc.so.6
#11 15.20       /usr/bin/ld: /lib64/ld-linux-x86-64.so.2: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib64/ld-linux-x86-64.so.2 when searching for /lib64/ld-linux-x86-64.so.2
#11 15.20       /usr/bin/ld: cannot find /lib64/ld-linux-x86-64.so.2
#11 15.20       /usr/bin/ld: /lib64/ld-linux-x86-64.so.2: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib64/ld-linux-x86-64.so.2 when searching for /lib64/ld-linux-x86-64.so.2
#11 15.20       collect2: error: ld returned 1 exit status
#11 15.20       extensions/ogr_wrap.cpp: In function ‘PyObject* PyInit__ogr()’:
#11 15.20       extensions/ogr_wrap.cpp:982:65: warning: ‘void PyEval_InitThreads()’ is deprecated [-Wdeprecated-declarations]
#11 15.20         982 | #     define SWIG_PYTHON_INITIALIZE_THREADS  PyEval_InitThreads()
#11 15.20             |                                                                 ^
#11 15.20       extensions/ogr_wrap.cpp:36970:3: note: in expansion of macro ‘SWIG_PYTHON_INITIALIZE_THREADS’
#11 15.20       36970 |   SWIG_PYTHON_INITIALIZE_THREADS;
#11 15.20             |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#11 15.20       In file included from /usr/local/include/python3.9/Python.h:140,
#11 15.20                        from extensions/ogr_wrap.cpp:180:
#11 15.20       /usr/local/include/python3.9/ceval.h:130:37: note: declared here
#11 15.20         130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void);
#11 15.20             |                                     ^~~~~~~~~~~~~~~~~~
#11 15.20       extensions/gdal_wrap.cpp: In function ‘PyObject* PyInit__gdal()’:
#11 15.20       extensions/gdal_wrap.cpp:982:65: warning: ‘void PyEval_InitThreads()’ is deprecated [-Wdeprecated-declarations]
#11 15.20         982 | #     define SWIG_PYTHON_INITIALIZE_THREADS  PyEval_InitThreads()
#11 15.20             |                                                                 ^
#11 15.20       extensions/gdal_wrap.cpp:46157:3: note: in expansion of macro ‘SWIG_PYTHON_INITIALIZE_THREADS’
#11 15.20       46157 |   SWIG_PYTHON_INITIALIZE_THREADS;
#11 15.20             |   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#11 15.20       In file included from /usr/local/include/python3.9/Python.h:140,
#11 15.20                        from extensions/gdal_wrap.cpp:180:
#11 15.20       /usr/local/include/python3.9/ceval.h:130:37: note: declared here
#11 15.20         130 | Py_DEPRECATED(3.9) PyAPI_FUNC(void) PyEval_InitThreads(void);
#11 15.20             |                                     ^~~~~~~~~~~~~~~~~~
#11 15.20       g++ -pthread -shared build/temp.linux-x86_64-3.9/extensions/gnm_wrap.o -L../../.libs -L../../ -L/usr/local/lib -L/usr/lib -lgdal -o build/lib.linux-x86_64-3.9/osgeo/_gnm.cpython-39-x86_64-linux-gnu.so
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libm.so.6: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libm.so.6 when searching for /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: cannot find /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libm.so.6: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libm.so.6 when searching for /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libmvec.so.1: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libmvec.so.1 when searching for /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       /usr/bin/ld: cannot find /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libmvec.so.1: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libmvec.so.1 when searching for /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       collect2: error: ld returned 1 exit status
#11 15.20       g++ -pthread -shared build/temp.linux-x86_64-3.9/extensions/osr_wrap.o -L../../.libs -L../../ -L/usr/local/lib -L/usr/lib -lgdal -o build/lib.linux-x86_64-3.9/osgeo/_osr.cpython-39-x86_64-linux-gnu.so
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libm.so.6: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libm.so.6 when searching for /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: cannot find /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libm.so.6: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libm.so.6 when searching for /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libmvec.so.1: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libmvec.so.1 when searching for /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       /usr/bin/ld: cannot find /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libmvec.so.1: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libmvec.so.1 when searching for /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       collect2: error: ld returned 1 exit status
#11 15.20       g++ -pthread -shared build/temp.linux-x86_64-3.9/extensions/ogr_wrap.o -L../../.libs -L../../ -L/usr/local/lib -L/usr/lib -lgdal -o build/lib.linux-x86_64-3.9/osgeo/_ogr.cpython-39-x86_64-linux-gnu.so
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libm.so.6: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libm.so.6 when searching for /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: cannot find /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libm.so.6: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libm.so.6 when searching for /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libmvec.so.1: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libmvec.so.1 when searching for /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       /usr/bin/ld: cannot find /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libmvec.so.1: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libmvec.so.1 when searching for /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       collect2: error: ld returned 1 exit status
#11 15.20       g++ -pthread -shared build/temp.linux-x86_64-3.9/extensions/gdal_wrap.o -L../../.libs -L../../ -L/usr/local/lib -L/usr/lib -lgdal -o build/lib.linux-x86_64-3.9/osgeo/_gdal.cpython-39-x86_64-linux-gnu.so
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libm.so.6: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libm.so.6 when searching for /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: cannot find /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libm.so.6: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libm.so.6 when searching for /lib/x86_64-linux-gnu/libm.so.6
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libmvec.so.1: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libmvec.so.1 when searching for /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       /usr/bin/ld: cannot find /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       /usr/bin/ld: /lib/x86_64-linux-gnu/libmvec.so.1: unknown type [0x13] section `.relr.dyn'
#11 15.20       /usr/bin/ld: skipping incompatible /lib/x86_64-linux-gnu/libmvec.so.1 when searching for /lib/x86_64-linux-gnu/libmvec.so.1
#11 15.20       collect2: error: ld returned 1 exit status
#11 15.20       error: command '/usr/bin/g++' failed with exit code 1
#11 15.20       [end of output]
#11 ERROR: executor failed running [/bin/sh -c pip3 install --no-cache-dir GDAL==3.5.0]: exit code: 1
python
docker
gcc
g++
gdal
EN

回答 1

Stack Overflow用户

发布于 2022-11-11 10:50:29

我也有同样的问题，同样的错误。

代码语言：javascript
复制
/usr/bin/ld: /lib/x86_64-linux-gnu/libmvec.so.1: unknown type [0x13] section `.relr.dyn'

在一个容器中，安装了几天前功能良好的R包"bit“。我认为这与此有关：https://www.mail-archive.com/debian-glibc@lists.debian.org/msg61461.html，所以如果您找到解决方案，我将很高兴知道它。

票数 3
EN
页面原文内容由Stack Overflow提供。腾讯云小微IT领域专用引擎提供翻译支持
原文链接：

https://stackoverflow.com/questions/74377793

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