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社区首页 >问答首页 >如何安装没有sudo的mpi4py？

问如何安装没有sudo的mpi4py？
EN

Stack Overflow用户
提问于 2022-07-31 10:59:03
回答 1查看 106关注 0票数 0

当我尝试在Ubuntu 22上安装没有sudo的mpi4py时，我会得到以下错误( sudo工作得很好)：

代码语言：javascript
复制
  ERROR: Command errored out with exit status 1:
   command: /home/vedant/miniconda3/bin/python /home/vedant/miniconda3/lib/python3.9/site-packages/pip/_vendor/pep517/in_process/_in_process.py build_wheel /tmp/tmp25az93fg
       cwd: /tmp/pip-install-khu2q4rx/mpi4py_194f67e86692449fbf667e77b7a580c2
  Complete output (404 lines):
  running bdist_wheel
  running build
  running build_src
  running build_py
  creating build
  creating build/lib.linux-x86_64-cpython-39
  creating build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/bench.py -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/__init__.py -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/run.py -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/__main__.py -> build/lib.linux-x86_64-cpython-39/mpi4py
  creating build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/_base.py -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/aplus.py -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/_lib.py -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/server.py -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/_core.py -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/__init__.py -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/__main__.py -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/pool.py -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  creating build/lib.linux-x86_64-cpython-39/mpi4py/util
  copying src/mpi4py/util/dtlib.py -> build/lib.linux-x86_64-cpython-39/mpi4py/util
  copying src/mpi4py/util/__init__.py -> build/lib.linux-x86_64-cpython-39/mpi4py/util
  copying src/mpi4py/util/pkl5.py -> build/lib.linux-x86_64-cpython-39/mpi4py/util
  copying src/mpi4py/py.typed -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/__init__.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/__main__.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/run.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/dl.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/MPI.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/bench.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/__init__.pxd -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/libmpi.pxd -> build/lib.linux-x86_64-cpython-39/mpi4py
  copying src/mpi4py/MPI.pxd -> build/lib.linux-x86_64-cpython-39/mpi4py
  creating build/lib.linux-x86_64-cpython-39/mpi4py/include
  creating build/lib.linux-x86_64-cpython-39/mpi4py/include/mpi4py
  copying src/mpi4py/include/mpi4py/mpi4py.MPI.h -> build/lib.linux-x86_64-cpython-39/mpi4py/include/mpi4py
  copying src/mpi4py/include/mpi4py/mpi4py.MPI_api.h -> build/lib.linux-x86_64-cpython-39/mpi4py/include/mpi4py
  copying src/mpi4py/include/mpi4py/mpi4py.h -> build/lib.linux-x86_64-cpython-39/mpi4py/include/mpi4py
  copying src/mpi4py/include/mpi4py/mpi4py.i -> build/lib.linux-x86_64-cpython-39/mpi4py/include/mpi4py
  copying src/mpi4py/include/mpi4py/mpi.pxi -> build/lib.linux-x86_64-cpython-39/mpi4py/include/mpi4py
  copying src/mpi4py/futures/pool.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/server.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/__init__.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/__main__.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/aplus.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/_lib.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/futures/_core.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py/futures
  copying src/mpi4py/util/__init__.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py/util
  copying src/mpi4py/util/dtlib.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py/util
  copying src/mpi4py/util/pkl5.pyi -> build/lib.linux-x86_64-cpython-39/mpi4py/util
  running build_clib
  MPI configuration: [mpi] from 'mpi.cfg'
  MPI C compiler:    /usr/bin/mpicc
  MPI C++ compiler:  /usr/bin/mpicxx
  MPI F compiler:    /usr/bin/mpifort
  MPI F90 compiler:  /usr/bin/mpif90
  MPI F77 compiler:  /usr/bin/mpif77
  checking for library 'lmpe' ...
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /home/vedant/miniconda3/include -I/home/vedant/miniconda3/include -fPIC -O2 -isystem /home/vedant/miniconda3/include -fPIC -c _configtest.c -o _configtest.o
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat _configtest.o -llmpe -o _configtest
  /home/vedant/miniconda3/compiler_compat/ld: cannot find -llmpe
  collect2: error: ld returned 1 exit status
  failure.
  removing: _configtest.c _configtest.o
  building 'mpe' dylib library
  creating build/temp.linux-x86_64-cpython-39
  creating build/temp.linux-x86_64-cpython-39/src
  creating build/temp.linux-x86_64-cpython-39/src/lib-pmpi
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /home/vedant/miniconda3/include -I/home/vedant/miniconda3/include -fPIC -O2 -isystem /home/vedant/miniconda3/include -fPIC -c src/lib-pmpi/mpe.c -o build/temp.linux-x86_64-cpython-39/src/lib-pmpi/mpe.o
  creating build/lib.linux-x86_64-cpython-39/mpi4py/lib-pmpi
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat -shared -Wl,-rpath,/home/vedant/miniconda3/lib -Wl,-rpath-link,/home/vedant/miniconda3/lib -L/home/vedant/miniconda3/lib -L/home/vedant/miniconda3/lib -Wl,-rpath,/home/vedant/miniconda3/lib -Wl,-rpath-link,/home/vedant/miniconda3/lib -L/home/vedant/miniconda3/lib -Wl,--no-as-needed build/temp.linux-x86_64-cpython-39/src/lib-pmpi/mpe.o -o build/lib.linux-x86_64-cpython-39/mpi4py/lib-pmpi/libmpe.so
  checking for library 'vt-mpi' ...
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /home/vedant/miniconda3/include -I/home/vedant/miniconda3/include -fPIC -O2 -isystem /home/vedant/miniconda3/include -fPIC -c _configtest.c -o _configtest.o
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat _configtest.o -lvt-mpi -o _configtest
  /home/vedant/miniconda3/compiler_compat/ld: cannot find -lvt-mpi
  collect2: error: ld returned 1 exit status
  failure.
  removing: _configtest.c _configtest.o
  checking for library 'vt.mpi' ...
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /home/vedant/miniconda3/include -I/home/vedant/miniconda3/include -fPIC -O2 -isystem /home/vedant/miniconda3/include -fPIC -c _configtest.c -o _configtest.o
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat _configtest.o -lvt.mpi -o _configtest
  /home/vedant/miniconda3/compiler_compat/ld: cannot find -lvt.mpi
  collect2: error: ld returned 1 exit status
  failure.
  removing: _configtest.c _configtest.o
  building 'vt' dylib library
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /home/vedant/miniconda3/include -I/home/vedant/miniconda3/include -fPIC -O2 -isystem /home/vedant/miniconda3/include -fPIC -c src/lib-pmpi/vt.c -o build/temp.linux-x86_64-cpython-39/src/lib-pmpi/vt.o
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat -shared -Wl,-rpath,/home/vedant/miniconda3/lib -Wl,-rpath-link,/home/vedant/miniconda3/lib -L/home/vedant/miniconda3/lib -L/home/vedant/miniconda3/lib -Wl,-rpath,/home/vedant/miniconda3/lib -Wl,-rpath-link,/home/vedant/miniconda3/lib -L/home/vedant/miniconda3/lib -Wl,--no-as-needed build/temp.linux-x86_64-cpython-39/src/lib-pmpi/vt.o -o build/lib.linux-x86_64-cpython-39/mpi4py/lib-pmpi/libvt.so
  checking for library 'vt-mpi' ...
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat -Wno-unused-result -Wsign-compare -DNDEBUG -O2 -Wall -fPIC -O2 -isystem /home/vedant/miniconda3/include -I/home/vedant/miniconda3/include -fPIC -O2 -isystem /home/vedant/miniconda3/include -fPIC -c _configtest.c -o _configtest.o
  /usr/bin/mpicc -pthread -B /home/vedant/miniconda3/compiler_compat _configtest.o -lvt-mpi -o _configtest
  /home/vedant/miniconda3/compiler_compat/ld: cannot find -lvt-mpi
  collect2: error: ld returned 1 exit status

我看过这篇文章：Installing mpi4py和run sudo apt install mpi，它已经成功了。所以，which mpiexec打印/usr/bin/mpiexec。

我读过这篇文章：Cannot install mpi4py on CentOS 7，并做了以下工作：

代码语言：javascript
复制
sudo apt install python3-mpi4py
python
linux
mpi
EN

回答 1

Stack Overflow用户

回答已采纳

发布于 2022-07-31 11:08:28

答案是使用conda而不是pip：

代码语言：javascript
复制
conda install -c conda-forge mpi
conda install -c conda-forge mpi4py
票数 0
EN
页面原文内容由Stack Overflow提供。腾讯云小微IT领域专用引擎提供翻译支持
原文链接：

https://stackoverflow.com/questions/73182689

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