我正在尝试使用brms设置我的传销的前科。我已经用我之前设置的模型运行了我的模型,没有错误消息,现在想用pp_check检查它们。我得到了一个'Error in sdata[paste0("Y",usc(resp))]:subscript out bounds‘错误,并且找不到任何关于为什么会发生这种情况的提示。谢谢!
编辑:我已经检查了fit的结构,只有init变量是0,我认为应该是这种情况,因为我将初始化参数设置为0?否则,我看不出有什么问题。
我不能尝试任何东西,因为谷歌搜索什么都没有。
library(brms)
df <- data.frame( subjno = as.factor(c('sub-01', 'sub-01','sub-01','sub-01','sub02','sub02','sub02','sub02')),
L1 = c(0.898922096, -0.673393065, -2.240150247,-0.932520537, -0.472701111, -0.188825324,0.808675919, 0.293666248),
L2 = c(0.64888, 2.0891, -0.655322708, 0.007098555, -0.648887797, -0.249716343, -0.698128026,0.119511014),
W1 = c(0.5,0.5,-0.5,-0.5,0.5,-0.5,0.5,-0.5), W2 = c(0.5,-0.5,0.5,-0.5,0.5,0.5,-0.5,-0.5),
t = as.factor(c(12,23,34,45,12,23,34,45)))
ff_s = brmsformula(cbind(L1,L2) ~ W1 * W2 * t +
(W1*W2* t|p|subjno))
get_prior(formula = ff_s, family = gaussian(),
data = df)
pp_s <- c(set_prior('normal(0,1)', class = "b"),
set_prior("normal(0,10)", class = "sd", resp = 'L1'),
set_prior("normal(0,10)", class = "sd", resp = 'L2'),
set_prior("normal(0,5)", class = "sigma",resp = 'L1'),
set_prior("normal(0,5)", class = "sigma",resp = 'L2'),
set_prior("normal(0,10)", class = "Intercept", resp = 'L1'),
set_prior("normal(0,10)", class = "Intercept", resp = 'L2'),
set_prior("lkj(3)", class = "cor"))
fit_s <- brm(formula = ff_s,
data = df, family = gaussian(),
prior = pp_s,
chains = 6, cores = 3,
iter = 2e3, warmup = 1e3,
init = 0,
sample_prior = "only")
pp_check(fit_s)发布于 2019-01-11 19:32:26
我发现我在调用函数pp_check时没有指定我感兴趣的级别,问题解决了!
https://stackoverflow.com/questions/54127905
复制相似问题